Saturday 29 September 2012

HIV treatment : Gene Therapy shows promise


Timothy Brown, became world famous as the first—and so far the only—person to apparently have been cured of his HIV infection. In an interview, he said,“My case is the proof in concept that HIV can be cured,”.




Certainly. His unique case did give hope to the science community as well as possible hints into treating HIV.  Gene therapy is one such strategy that is being actively being worked on to emulate Timothy's case : he received blood transfusions from a patient having a specific mutation which makes a person resistant to HIV.

In one particular case study, a patient in Chicago who received gene therapy and then stopped taking antiretroviral drugs saw his HIV return within a month, as normally happens when people interrupt their treatment. But a few weeks later, it was seen that the virus began to decline, and it dropped to undetectable levels in accordance with the evidence that the gene therapy had altered his T cells.

"Those kinetics are very different from what I've seen in treatment interruption studies, and we've done many," says Pablo Tebas, an infectious disease clinician at the University of Pennsylvania who heads the East Coast study of six participants. "This patient goes down, way down."

Tebas recognizes that his study is uncontrolled and that they've seen this response in only one patient. What's more, the patient already had a natural advantage because he has a crippled CCR5 gene in one of the two copies he inherited. Tebas suspects that the gene therapy coupled with his natural CCR5 mutation combined to lead to the dramatic result. "This is a very small experiment, and I don't think it's a cure by any means, but the Berlin patient is only one patient, and it changed research priorities," Tebas says. "This shows that there's a correlation between antiviral activity and the proportion of modified cells. It shows a path forward."

Although researchers do not expect the gene therapy to entirely clear HIV from the body, they hope it will create a "functional cure"—in other words, contain the virus to such a powerful extent that people no longer need antiretrovirals.

Virologist David Margolis, who is conducting his own HIV cure studies at the University of North Carolina, Chapel Hill, says many questions remain about the impact of this gene therapy, however. "These data are interesting, and encouraging, but still incomplete," he says. Yet Margolis is "impressed" by the percentage of cells that have the artificially modified CCR5 gene.
Even if this gene therapy proves itself, the cost and technical challenge of the intervention means it likely will have little chance of being used outside of wealthy countries. But Tebas notes that the cost of antiretrovirals also is high and that any calculation would have to balance one against the other.

Acknowedgement:

 http://news.sciencemag.org/sciencenow/2011/09/gene-therapy-may-thwart-hiv.html?ref=hp

Friday 28 September 2012

Panax ginseng : The miracle of a plant





Panax ginseng is a plant which belongs to the Araliaceae family and is a slow growing perennial plant with fleshy roots. The genus Panax means "all-heal" in Greek, sharing its origin with "panacea" and was named so becuase of its well known and wide use as in Chinsese medicine as a muscle relaxant. Panax ginseng should not be confused with American ginseng, Siberian ginseng, or Panax pseudoginseng. Strangely, ginseng grows only in the northern hemisphere- in the cooler climates.




The name ginseng is derived from the chinese term rénshēn where rén means "man" and shēn means a kind of herb; this refers to the root's characteristic forked shape, which resembles the legs of a man.


Fresh or dried root of ginseng is used for various therapeutic reasons. Some of these uses are as follows :

  • Internal use
    • To improve mood, physical & intellectual performance.
    • In case of lack of appetite, stress, insomnia, chronic illness.
    • Helps men with impotence and sexual problems, and is a good general tonic.
    • Promotes vasodilatation, and also act as an anxiolytic as well as antidepressant.
    • Effective in stimulating learning, memory, and physical capabilities 
    • Supporting radioprotection, providing resistance to infection and having excellent antioxidant and anti-fatigue effects.
    • It is also used to enhance energy metabolism and reducing cholesterol and triglycerides while elevating HDL levels.
  •   External use
    • Used in cosmetics for its rejuvenating properties.
    • Beneficial effect on circulation and the plant regulates the tone of the smooth muscles of the blood vessels.
    • This vast amount of properties give Ginseng an almost unlimited use in cosmetics. Its activity makes it useful in nourishing creams, in treating wrinkled and aged skin and in all cosmetic products used to retard the onset of age.
    • In body milks and bath products, Ginseng acts by optimizing the cutaneous metabolism of the whole body and in capillary products, Ginseng may be used in treatment products for weak hair and lotions for preventing hair loss as it stimulates growth and gives strength.
 



Science & Spirituality - Two sides of the same coin


Something that Carl Sagan said matches my views quite closely :

“Science is not only compatible with spirituality; it is a profound source of spirituality. When we recognize our place in an immensity of light‐years and in the passage of ages, when we grasp the intricacy, beauty, and subtlety of life, then that soaring feeling, that sense of elation and humility combined, is surely spiritual. So are our emotions in the presence of great art or music or literature, or acts of exemplary selfless courage such as those of Mohandas Gandhi or Martin Luther King, Jr. The notion that science and spirituality are somehow mutually exclusive does a disservice to both.” 

 Even Albert Einstein, in his later years, became a something of a believer. He insisted that "Science without religion is lame, Religion without science is blind." Being a believer does not have to even mean believing in a particular god - it could be something as simple as believing in an idea. The idea of a power more powerful than us. 

 

Some schools of thought say that our thoughts are supposed to be like a form of a wave energy with which we create our universe. Buddha said, 'As you think, so you are.' We could explain all our spiritual laws by means of theoretical physics, by speaking about them at cellular and molecular level even- and we could 'experience' the inner depths of spirituality to be at peace with ourselves and feel the guidance leading us towards Knowledge. And 'Science' is from a latin word which means 'to know'. 

I believe we need science to explain spirituality and we need spirituality to give us an inner peace and guidance to do science

Sunday 16 September 2012

India's National Microbe!

Move over peacock & tiger, now India needs a national microbe. 

Eight candidates have been shortlisted and they sound better than our politicians in marketing themselves for votes ;)

1. Mucor :  Mighty Mucor :




Although I look like fluffy cotton, I am not a delicate darling. I can breakdown hard stuff like wood and cardboard. With waste mountains eclipsing the sun in our cities you just can't do without me. I am your source of the new fuel 'ethanol' in cars.


2. Rhizobium : Ready Rhizo



Although I live in a rented house – root nodules of leguminous plants, I pay a very substantial rent by fixing nitrogen, the building blocks of proteins for all the land and the landlord. Won't you vote for me?

 3. Blue Mold :  Bold Blue mold




People keep me apart because I cause food spoilage. But I ooze a substance called Penicillin which is used as an important medicine.

4. Wild yeast : Wild wild yeast


 I get under urad dal's skin and secretly make the idli batter rise. People think I am pungent but I give plenty of B vitamins. I am the wild yeast. Vote for the mysterious me!!

5. Bateriophage T4 : Captain Phago


 We may be 100 times smaller than a bacterium but we give the power to the Ganga. We are the magicians with a wand that inject toxins into bad bugs and make them vanish to restore rivers to pristinity. Vote for Captain Phago toli and we will take charge clearly!

6. Spirogyra : Sunny spiro
 I am the cheerful green hero which floats easily on freshwater. I love to hog the sunlight to trap carbon and drive away climate change blues. I am the hero of the 21st century. Don't forget to vote for me.

7. E. Coli : King coli


 I am the king of the gut. I grow so fast that I keep all the nasty bugs out. I am not all mass and no substance - I make a very important vitamin K2 without which you feel weak and tired. So you need my vote and I need yours.

8. Lactobacillus : Longy lacto 


 Do you know who makes yummy dahi and paneer, who keeps your gut healthy and drives away nasty bugs? It's me, it's me!! So vote for me.



 So what are you waiting for! Cast your votes here :)

(Wonder who got this interesting idea?)

Thursday 6 September 2012

Mass extinction of Dinosaurs- Asteroid wasn't the only culprit it seems.


A research by New University of Washington research has indicated that apparently the mass extinction of dinosaurs was already ongoing when the six-mile asteroid hit Mexico's Yucatán Peninsula 65 million years ago.  Due to the volcanic eruptions on India's Deccan Plateau that heated up the planet and killed life on the ocean floor, the mass extinction was already under way.

The press report can be read here:

Wednesday 5 September 2012

Protease research in the era of systems biology



Proteins as enzymes transform/digest/change other biomolecules. Proteases are proteins- which digest other proteins. And you probably guessed it, proteases are used for regulation of proteins, especially enzymes. In most cases proteases act as specific modulators of signaling molecules and their underlying pathways in addition to their degradative roles. However, proteases do not act alone, but form cascades, circuits and networks that all dynamically interconnect to form the protease web, which defines the proteolytic potential of a cell or tissue in a defined condition.

The most famous protease is the HIV-1 protease.






To describe the protease web and its net activity several novel high-throughput proteomic techniques, in the field termed degradomics, have been developed. Emerging systems biology methods to evaluate the expression, activity and substrate discovery of proteases are presented. Understanding the protease web and its perturbations in pathology will help to develop new therapeutics for the treatment of diseases, such as cancer, arthritis and chronic obstructive pulmonary diseases.

Source: http://www.clip.ubc.ca/UserFiles/File/adk_biol_chem_07.pdf

Breast cancer patients with high density mammograms do not have increased risk of death


According to a study conducted in over 9,000 women diagnosed with breast cancer, high mammographic density was not associated with the risk of death from breast cancer or death from all causes combined. This results would could make one wonder why this is so considering that high mammographic breast density ups the risk for developing breast cancer but this study has clarified that its not associated with the risk of death among women diagnosed with breast cancer.



To view an interview with a radiologist about digital mammography and the challenges posed by dense breasts, please visit: http://benchmarks.cancer.gov/2012/08/zuurbier-discusses-digital-mammography-and-dense-breasts/




Link between Parkinson Disease and Cancer


University of Utah study examines association between Parkinson disease and cancer 


A University of Utah, Salt Lake City study that used a Utah genealogic database and a statewide cancer registry to examine the relationship between Parkinson disease (PD) and cancer suggests an increased risk of prostate cancer and melanoma in patients with PD and their relatives, according to a report published Online First by Archives of Neurology, a JAMA Network publication. The University of Utah is home to the Huntsman Cancer Institute.

The press release can be read here:


Source: National Cancer Insitute